About Publications Experience Teaching Service

I am a computer science Ph.D. student at Yale University advised by Professor Rex Ying. Before that, I obtained my B.S. degree at Shanghai Jiao Tong University (SJTU) in 2022. I majored in mathematics and applied mathematics (Zhiyuan Honors Program).

I am generally interested in Large Language Models (LLMs) and Graph Foundation Models (GFMs), including:

  • Developing scalable foundation models tailored for diverse graph-structured data
  • Designing efficient Graph Retireval Augmented Generation (RAG) to enhance LLM reasoning abilities
  • Applying advanced graph models to real-world applications, such as retail product networks and recommendation systems
  • Advancing LLM capabilities in temporal reasoning and time series forecasting
  • Improving AI models in terms of trustworthiness, transparency, and reliability

If you share similar interests or work in related areas, feel free to reach out. I am always open to collaboration!

Email  /  LinkedIn  /  Github  /  Google Scholar

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Selected Publications

Preprint
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MTBench: A Multimodal Time Series Benchmark for Temporal Reasoning and Question Answering
Jialin Chen, Aosong Feng, Ziyu Zhao, Juan Garza, Gaukhar Nurbek, Cheng Qin, Ali Maatouk, Leandros Tassiulas, Yifeng Gao, Rex Ying

Paper  /  Github
Preprint
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GFSE: A Foundational Model For Graph Structural Encoding
Jialin Chen, Haolan Zuo, Haoyu Peter Wang, Siqi Miao, Pan Li, Rex Ying

Paper  /  Github
KDD 2025
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LitFM: A Retrieval Augmented Structure-aware Foundation Model For Citation Graphs
Jiasheng Zhang, Ali Maatouk, Jialin Chen, Ngoc Bui, Qianqian Xie, Leandros Tassiulas, Jie Shao, Hua Xu, Rex Ying

Paper  /  Github
NeurIPS 2024
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From Similarity to Superiority: Channel Clustering for Time Series Forecasting
Jialin Chen, Jan Eric Lenssen, Aosong Feng, Weihua Hu, Matthias Fey, Leandros Tassiulas, Jure Leskovec, Rex Ying

Paper  /  Github
NeurIPS DB 2024
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DTGB: A Comprehensive Benchmark for Dynamic Text-Attributed Graphsy
Jiasheng Zhang, Jialin Chen, Menglin Yang, Aosong Feng, Shuang Liang, Jie Shao, Rex Ying

Paper  /  Github
NeurIPS 2023
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TempME: Towards the Explainability of Temporal Graph Neural Networks via Motif Discovery
Jialin Chen, Rex Ying

Paper  /  Github
NeurIPS 2023
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D4Explainer: In-distribution Explanations of Graph Neural Network via Discrete Denoising Diffusion
Jialin Chen, Shirley Wu, Abhijit Gupta, Rex Ying

Paper  /  Github
COLING 2022
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Modeling Hierarchical Reasoning Chains by Linking Discourse Units and Key Phrases for Reading Comprehension
Jialin Chen, Zhuosheng Zhang, Hai Zhao

Paper  /  Github
IEEE Data Engineering Bulletin 2023
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Generative Explanations for Graph Neural Network: Methods and Evaluations
Jialin Chen, Kenza Amara, Junchi Yu, Rex Ying
IEEE Data Engineering Bulletin, 2023

Paper  /  Github

Experience

Applied Scientist Intern
Amazon Inc., 2024.05 - 2024.12
  • Proposed a novel graph-aware retriever to enhance LLMs’ capabilities in question answering and complex reasoning on knowledge graphs;
  • Developed joint training of graph retriever and LLM reasoner in Graph RAG pipeline, improved the model's generalizability to open-domain scenario.
  • Machine Learning Intern
    Kumo.AI Inc., 2023.05 - 2023.08
  • Worked on improving time series forecasting on retail tabular dataset;
  • Developed an autoregressive generative model for custom time series, contributing to feature development related to forecasting queries.
  • Teaching

    • Teaching Assistant, 2023 Fall, Deep Learning on Graph-Structured Data (CPSC 483) Course Website
    • Teaching Assistant, 2023 Spring, Trustworthy Deep Learning (CPSC 680) Course Website

    Academic Services

    • Conference Reviewer: NeurIPS, ICML, ICLR, KDD, AAAI, LoG
    • Journal Reviewer: IEEE Transactions on Artificial Intelligence, Journal of Biomedical Informatics
    • Organizer: NEGEL workshop at TheWebConf 2025 Website